C F G L M N P R S T V

G

getCumlativeP(int, int, int, int) - Method in class net.sf.varscan.FishersExact

Calculates the one-tail P-value for the Fisher Exact test.

getLeftTailedP(int, int, int, int) - Method in class net.sf.varscan.FishersExact

Calculates the left-tail P-value for the Fisher Exact test.

getP(int, int, int, int) - Method in class net.sf.varscan.FishersExact

calculates the P-value for this specific state

getRightTailedP(int, int, int, int) - Method in class net.sf.varscan.FishersExact

Calculates the right-tail P-value for the Fisher Exact test.

getSignificance(int, int) - Static method in class net.sf.varscan.VarScan

Calculates significance of read counts versus baseline error

getSignificance(int, int, int, int) - Static method in class net.sf.varscan.VarScan

Calculates significance of read counts between two samples

getTwoTailedP(int, int, int, int) - Method in class net.sf.varscan.FishersExact

Calculates the two-tailed P-value for the Fisher Exact test.